People – Plant Systems Biology @ The Coruzzi Lab

Plant Systems Biology @ The Coruzzi Lab

From predictive network modeling to trait evolution

Current Lab Members

Gloria Coruzzi
Curriculum Vitae
PI
gloria.coruzzi at nyu.edu
Google Scholar profile

Manpreet Katari
Clinical Assoc. Prof.
BioInformatics Manager
mkatari at nyu.edu
profile

Ji Huang
Post-doc
jh6577@nyu.edu
profile

Carly Shanks
Post-doc
carly.shanks@nyu.edu

Tim Jeffers
Post-Doc
tlj244@nyu.edu

Kate LaVallee
Masters Student

Veronica Marijke Sondervan
PhD Student
vms351@nyu.edu

Kirk MacKinnon
Post-Doc
km5767@nyu.edu

Will Hinckley
PhD Student
weh6454@nyu.edu

Lauren Audi
PhD Student
LA2376@nyu.edu

Bingran Shen
PhD Student (With Dr. Dennis Shasha @ NYU Courant)
bs4290@nyu.edu

Amari Hill

PhD Student

arh582@nyu.edu

Samantha Frangos
Laboratory Technician
sf2919@nyu.edu

Angelo Pasquino
Laboratory Manager
AVP307@nyu.edu

Coruzzi Lab Photos

Labs Without Walls Meeting at the Center for Genomics and Systems Biology, with Collaborators from CNRS (France) – Sept 2022

Coruzzi Lab Pictured with Friends and Collaborators From France, in Washington Square Park – Sept 2022

PI Gloria Coruzzi and Technician Samantha Frangos enjoying some Lunch in Grand Central

PhD Student Veronica Sondervan and Technician Samantha Frangos with PhD Rotation Students Amari Hill and Isabel Bojanini Celebrating Halloween – Oct 2022

The Coruzzi Lab, back in action! June 2021

The Coruzzi lab at their favorite pizza spot, Ribalta. January 2020

Collaborators

Alumni Collaborators

Students

Undergraduate Students	High School Students
Teresa Qi Manuela von Sneidern Julius Yunis Nafisa Chowdhury Ritu Vadodaria Shanze Gilani Nick Jakupco Hajra Jamal Justin Halim	Angela Fan Jenny Yeoh-Wang Ariel Levy Sam Goldman Jenny Gao

Alumni

Molly Edwards
Nancy Francoeur
Rebecca Davidson
Jonathan Kelfer
Indrani Mukherjee
Damion Nero
Lee Parnell Thompson
Rebecca Davidson
Stuti Srivastava
Awni Mousa
Suzan Runko

Joan Doidy
Tim Jeffers
Anna-Lena Schinke
Grace Kim
Sophie Leran
Amanda Campbell
Eléonore Bouguyon
Reetu Tuteja
Shipra Mittal
Che-Lun Juang
Laurie Leonelli
Sophia Shih

Alexandra Clark

In memory and tribute to Alexandra Page Clark: Student, Research Scientist, Friend

August 2023

NEW! preprint of the “Living Fossil” Wollemia nobilis genome available on BioRxiv

The genome of the Wollemi pine, a critically endangered “living fossil” unchanged since the Cretaceous, reveals extensive ancient transposon activity

Featured Press Releases for Wollemi Pine Article!

November 2022

NEW Frontiers article written by Coruzzi Lab Post Doc Carly Shanks and colleagues!

Validation of a high-confidence regulatory network for gene-to-NUE phenotype in field-grown rice

Front. Plant Sci., 25 November 2022
Sec. Plant Physiology
https://doi.org/10.3389/fpls.2022.1006044

October 2022

The TARGET System: Rapid Identification of Direct Targets of Transcription Factors by Gene Regulation in Plant Cells

Our TARGET system is published in as part of the Methods in Molecular Biology book series on Transcription Factor Regulatory Networks. (MIMB,volume 2594)

Transcription Factor Regulatory Networks pp 1–12 Matthew D. Brooks, Kelsey M. Reed, Gabriel Krouk, Gloria M. Coruzzi & Bastiaan O. R. Bargmann Protocol First Online: 21 October 2022

DOI: 10.1007/978-1-0716-2815-7_1

December 2021

Our recent paper

Plant ecological genomics at the limits of life in the Atacama Desert

has been cited by PNAS, to be in the top 5% of their Altmetric Attention Score. This score provides an indicator of the amount of attention that a PNAS article has received. So far, our paper has been written about in 37 news stories from 30 outlets!

November 2021

NEW PNAS paper published on research led by collaborator Dr. Rodrigo A. Gutierrez, in Chile. Thank you for letting us join you on this 10- year journey!

Plant ecological genomics at the limits of life in the Atacama Desert

Featured Press Releases for PNAS Article!

Genetic Engineering & Biotechnology News

Technology Networks

Cosmos Magazine

Daily Mail (UK)

October 2021

NSF's Research News Post! NSF PGRP NutriNet Project Machine learning uncovers 'genes of importance' in agriculture

September 2021

Cheng et. al., (2021) Nature Communications Paper

“Evolutionarily informed machine learning enhances the power of predictive gene-to-phenotype relationships.” Click here to read the article on Nature Communications! Click here to read the wonderful NYU Press Release!

May 2020

PNAS Article: "Nutrient dose-responsive transcriptome changes driven by Michaelis–Menten kinetics underlie plant growth rates" on PNAS!

March 2020

Press release on NLP7, congratulations to Alvarez and Schinke et al.

Click Here to find out more!

April 2019

Gloria Coruzzi is elected into NAS!

Click Here to find out more!

coruzzilab Follow

Plant Systems Biology lab @nyuniversity. Account run by the people in the lab. Opinions are our own.

coruzzilab @coruzzilab ·

13 Sep

This presentation is a tribute to Joe Key for his vision and leadership at the frontier of plant molecular biology, both scientifically and for community building. We are grateful for his vision and mourn his passing on Aug. 19, 2024. Gloria Coruzzi, NYU https://coruzzilab.bio.nyu.edu/wp-content/uploads/2024/09/Joe-Key-Tribute-by-Coruzzi_NYU.pdf

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coruzzilab @coruzzilab ·

27 Jun

On May 17th, 2024 the @nyuniversity Annual Genome Symposium, hosted by the Center for Genomics and Systems Biology, honored the scientific achievements, life & career of dear friend, visionary, entrepreneur & mentor Dr. Philip Benfey. Recording Link:

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coruzzilab @coruzzilab ·

22 Sep 2023

Solved: The Enigma of the ‘Living Fossil’ Tree Preserved for 66 Million Years https://vervetimes.com/solved-the-enigma-of-the-living-fossil-tree-preserved-for-66-million-years/

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coruzzilab @coruzzilab ·

22 Sep 2023

Ancient Wollemi Pine: A Living Fossil Threatened with Extinction in Australia

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coruzzilab @coruzzilab ·

22 Sep 2023

"Living Fossil" Wollemi Pine Is Ancient, Inbred, And In A Lot Of Trouble

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